ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4w5rA2 - ECOD Domain | ECOD

ECOD/Domains/e4w5rA2

e4w5rA2

UID: 001407078

PDB

Range: A:579-836
PDB: 4W5R chain A(all domains)
UniProt: Q9UKV8 (all domains)
Gene: AGO2

Molecule: Protein argonaute-2

3D Structure

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Related Domains

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Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPiwi(2484.1.1.26)

Ligands

in contact, ≤ 4 Å

PhenolIPH
Magnesium ionMG
metal

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA

Pfam Families

Piwi domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 4W5R RCSB PDB: 4W5R PDBe: 4W5R UniProt: Q9UKV8

Downloads

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DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.