ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4uuyB1 - ECOD Domain | ECOD

ECOD/Domains/e4uuyB1

e4uuyB1

UID: 001409386

PDB

Range: B:2-348
PDB: 4UUY chain B(all domains)
UniProt: P27801 (all domains)
Gene: PEP3

Molecule: VACUOLAR MEMBRANE PROTEIN PEP3

3D Structure

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Related Domains

Browse other domains in Pep3_Vps18 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyPep3_Vps18(5.1.4.21)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Sulfate ion, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PF05131Pep3_Vps18

Pep3/Vps18/deep orange beta-propeller domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4UUY RCSB PDB: 4UUY PDBe: 4UUY UniProt: P27801

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.