ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3mc0B2 - ECOD Domain | ECOD

ECOD/Domains/e3mc0B2

e3mc0B2

UID: 000140984

PDB

Range: B:116-233
PDB: 3MC0 chain B(all domains)
UniProt: D0EMB6 (all domains)

Molecule: Enterotoxin SEG

3D Structure

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Related Domains

Browse other domains in Stap_Strp_tox_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyStap_Strp_tox_C(221.1.1.17)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02876Stap_Strp_tox_C

Staphylococcal/Streptococcal toxin, beta-grasp domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 3MC0 RCSB PDB: 3MC0 PDBe: 3MC0 UniProt: D0EMB6

Downloads

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