ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rngA1 - ECOD Domain | ECOD

ECOD/Domains/e4rngA1

e4rngA1

UID: 001411675

RepresentativePDB

Range: A:6-87
PDB: 4RNG chain A(all domains)
UniProt: B5YGD6 (all domains)
Gene: THEYE_A1538

Molecule: MtN3/saliva family

3D Structure

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Related Domains

Browse other domains in PQ-loop →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupTOG superfamily(6155)

HH-groupSWEET transporter(6155.1)

TT-groupSWEET transporter(6155.1.1)

FFamilyPQ-loop(6155.1.1.2)

Ligands

in contact, ≤ 4 Å

(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04193PQ-loop

PQ loop repeat

ClanCL0141MtN3-like

External Links

ECOD PDB View: 4RNG RCSB PDB: 4RNG PDBe: 4RNG UniProt: B5YGD6

Downloads

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