ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3p9zA2 - ECOD Domain | ECOD

ECOD/Domains/e3p9zA2

e3p9zA2

UID: 000141227

PDB

Range: A:23-140
PDB: 3P9Z chain A(all domains)
UniProt: O25822 (all domains)
Gene: HP_1224

Molecule: Uroporphyrinogen III cosynthase (HemD)

3D Structure

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Related Domains

Browse other domains in HEM4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupUroporphyrinogen III synthase (U3S, HemD)(2007.1.8)

FFamilyHEM4(2007.1.8.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Uroporphyrinogen-III synthase HemD

External Links

ECOD PDB View: 3P9Z RCSB PDB: 3P9Z PDBe: 3P9Z UniProt: O25822

Downloads

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