ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2mlrA1 - ECOD Domain | ECOD

ECOD/Domains/e2mlrA1

e2mlrA1

UID: 001412429

PDB

Range: A:100-263
PDB: 2MLR chain A(all domains)
UniProt: P39900 (all domains)
Gene: MMP12

Molecule: Macrophage metalloelastase

3D Structure

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Related Domains

Browse other domains in Peptidase_M10 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M10(2498.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINEPX4
Zinc ionZN
metal

Pfam Families

PF00413Peptidase_M10

Matrixin

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 2MLR RCSB PDB: 2MLR PDBe: 2MLR UniProt: P39900

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.