ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pioB1 - ECOD Domain | ECOD

ECOD/Domains/e4pioB1

e4pioB1

UID: 001412655

PDB

Range: B:4-321
PDB: 4PIO chain B(all domains)
UniProt: A0R5M8 (all domains)
Gene: egtD

Molecule: Histidine-specific methyltransferase EgtD

3D Structure

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Related Domains

Browse other domains in Methyltransf_33 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_33(2003.1.5.71)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
N,N-dimethyl-L-histidineAVI
Magnesium ionMG

Pfam Families

PF10017Methyltransf_33

Histidine-specific methyltransferase, SAM-dependent

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4PIO RCSB PDB: 4PIO PDBe: 4PIO UniProt: A0R5M8

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.