ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ptnC1 - ECOD Domain | ECOD

ECOD/Domains/e4ptnC1

e4ptnC1

UID: 001412671

PDB

Range: C:12-309
PDB: 4PTN chain C(all domains)
UniProt: P75682 (all domains)
Gene: yagE

Molecule: Probable 2-keto-3-deoxy-galactonate aldolase YagE

3D Structure

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Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
L-glyceraldehydeGXV
Magnesium ionMG

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4PTN RCSB PDB: 4PTN PDBe: 4PTN UniProt: P75682

Downloads

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metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.