ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4rjeA1 - ECOD Domain | ECOD

ECOD/Domains/e4rjeA1

e4rjeA1

UID: 001412739

PDB

Range: A:6-374
PDB: 4RJE chain A(all domains)
UniProt: Q44467 (all domains)

Molecule: Lactate oxidase

3D Structure

Loading viewer...

Related Domains

Browse other domains in FMN_dh →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyFMN_dh(2002.1.1.48)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOLFNR

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

FMN-dependent dehydrogenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4RJE RCSB PDB: 4RJE PDBe: 4RJE UniProt: Q44467

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.