ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rleA1 - ECOD Domain | ECOD

ECOD/Domains/e4rleA1

e4rleA1

UID: 001412743

PDB

Range: A:1-109
PDB: 4RLE chain A(all domains)
UniProt: P37538 (all domains)
Gene: darA

Molecule: Uncharacterized protein YaaQ

3D Structure

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Related Domains

Browse other domains in CdAMP_rec →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupGlnB-like(304.5)

TT-groupGlnB-like(304.5.1)

FFamilyCdAMP_rec(304.5.1.4)

Ligands

in contact, ≤ 4 Å

(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide2BA
NICKEL (II) IONNI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06153CdAMP_rec

Cyclic-di-AMP receptor

ClanCL0089GlnB-like

External Links

ECOD PDB View: 4RLE RCSB PDB: 4RLE PDBe: 4RLE UniProt: P37538

Downloads

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