ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4u9uB1 - ECOD Domain | ECOD

ECOD/Domains/e4u9uB1

e4u9uB1

UID: 001412780

PDB

Range: B:130-268
PDB: 4U9U chain B(all domains)
UniProt: Q9X4Q8 (all domains)
Gene: nqrF

Molecule: Na(+)-translocating NADH-quinone reductase subunit F

3D Structure

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Related Domains

Browse other domains in FAD_binding_6 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyFAD_binding_6(1.1.7.7)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Magnesium ionMG
metal

+ 1 additive (Acetate)

Pfam Families

PF00970FAD_binding_6

Oxidoreductase FAD-binding domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 4U9U RCSB PDB: 4U9U PDBe: 4U9U UniProt: Q9X4Q8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.