ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wjkB2 - ECOD Domain | ECOD

ECOD/Domains/e4wjkB2

e4wjkB2

UID: 001412978

PDB

Range: B:118-361
PDB: 4WJK chain B(all domains)
UniProt: P05556 (all domains)
Gene: ITGB1

Molecule: Integrin beta-1

3D Structure

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Related Domains

Browse other domains in Integrin_beta →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupvWA-like(2006.1.6)

FFamilyIntegrin_beta(2006.1.6.2)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Calcium ionCA
metal
Magnesium ion

Pfam Families

PF00362Integrin_beta

Integrin beta chain VWA domain

ClanCL0128vWA-like

External Links

ECOD PDB View: 4WJK RCSB PDB: 4WJK PDBe: 4WJK UniProt: P05556

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.