ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xsqA1 - ECOD Domain | ECOD

ECOD/Domains/e2xsqA1

e2xsqA1

UID: 000141346

PDB

Range: A:25-215
PDB: 2XSQ chain A(all domains)
UniProt: Q96DE0 (all domains)
Gene: NUDT16

Molecule: U8 SNORNA-DECAPPING ENZYME

3D Structure

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Related Domains

Browse other domains in Nudt16-like →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNudt16-like(221.4.1.13)

Ligands

in contact, ≤ 4 Å

Inosinic AcidIMP
drugDrugBank DB04566
Chloride ionCL
Magnesium ionMG

Pfam Families

PF22327Nudt16-like

U8 snoRNA-decapping enzyme-like

ClanCL0261NUDIX

External Links

ECOD PDB View: 2XSQ RCSB PDB: 2XSQ PDBe: 2XSQ UniProt: Q96DE0

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.