ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4askA1 - ECOD Domain | ECOD

ECOD/Domains/e4askA1

e4askA1

UID: 001413694

PDB

Range: A:1177-1292,A:1325-1487
PDB: 4ASK chain A(all domains)
UniProt: O15054 (all domains)
Gene: KDM6B

Molecule: LYSINE-SPECIFIC DEMETHYLASE 6B

3D Structure

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Related Domains

Browse other domains in JmjC →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC(10.12.1.9)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metal
3-[[2-pyridin-2-yl-6-(1,2,4,5-tetrahydro-3-benzazepin-3-yl)pyrimidin-4-yl]amino]propanoic acidK0I

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

External Links

ECOD PDB View: 4ASK RCSB PDB: 4ASK PDBe: 4ASK UniProt: O15054

Downloads

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