ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1gxdA4 - ECOD Domain | ECOD

ECOD/Domains/e1gxdA4

e1gxdA4

UID: 001414014

PDB

Range: A:1-80
PDB: 1GXD chain A(all domains)
UniProt: P08253 (all domains)
Gene: MMP2

Molecule: 72 KDA TYPE IV COLLAGENASE

3D Structure

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Related Domains

Browse other domains in PG_binding_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupPGBD-like(144)

HH-groupPGBD-like(144.1)

TT-groupPGBD-like(144.1.1)

FFamilyPG_binding_1(144.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01471PG_binding_1

Putative peptidoglycan binding domain

ClanCL0244PGBD

External Links

ECOD PDB View: 1GXD RCSB PDB: 1GXD PDBe: 1GXD UniProt: P08253

Downloads

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