ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kt1A1 - ECOD Domain | ECOD

ECOD/Domains/e3kt1A1

e3kt1A1

UID: 001414176

PDB

Range: A:268-305,A:328-559,A:586-635
PDB: 3KT1 chain A(all domains)
UniProt: P40032 (all domains)
Gene: TPA1

Molecule: PKHD-type hydroxylase TPA1

3D Structure

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Related Domains

Browse other domains in Ofd1_CTDD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyOfd1_CTDD(10.12.1.44)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10637Ofd1_CTDD

Oxoglutarate and iron-dependent oxygenase degradation C-term

ClanCL0029Cupin

External Links

ECOD PDB View: 3KT1 RCSB PDB: 3KT1 PDBe: 3KT1 UniProt: P40032

Downloads

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