ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3o79A1 - ECOD Domain | ECOD

ECOD/Domains/e3o79A1

e3o79A1

UID: 000141454

PDB

Range: A:126-222
PDB: 3O79 chain A(all domains)
UniProt: Q9TSF8 (all domains)
Gene: PrP

Molecule: Rabbit PrP

3D Structure

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Related Domains

Browse other domains in Prion →

Classification

AArchitecturea+b two layers(a.11)

XX-groupPrion-like(254)

HH-groupPrion-like(254.1)

TT-groupPrion-like(254.1.1)

FFamilyPrion(254.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Prion/Doppel alpha-helical domain

External Links

ECOD PDB View: 3O79 RCSB PDB: 3O79 PDBe: 3O79 UniProt: Q9TSF8

Downloads

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