ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nhyB2 - ECOD Domain | ECOD

ECOD/Domains/e4nhyB2

e4nhyB2

UID: 001414749

PDB

Range: B:24-249
PDB: 4NHY chain B(all domains)
UniProt: Q8N543 (all domains)
Gene: OGFOD1

Molecule: 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1

3D Structure

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Related Domains

Browse other domains in 2OG-FeII_Oxy_4 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamily2OG-FeII_Oxy_4(10.12.1.54)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
PYRIDINE-2,4-DICARBOXYLIC ACIDPD2

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF136612OG-FeII_Oxy_4

2OG-Fe(II) oxygenase superfamily

ClanCL0029Cupin

External Links

ECOD PDB View: 4NHY RCSB PDB: 4NHY PDBe: 4NHY UniProt: Q8N543

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.