ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3q1dA1 - ECOD Domain | ECOD

ECOD/Domains/e3q1dA1

e3q1dA1

UID: 000142202

PDB

Range: A:122-168
PDB: 3Q1D chain A(all domains)
UniProt: Q9BYV2 (all domains)
Gene: TRIM54

Molecule: Tripartite motif-containing protein 54

3D Structure

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Related Domains

Browse other domains in zf-B_box →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupB-box zinc-binding domain-like(904)

HH-groupB-box zinc-binding domain(904.1)

TT-groupB-box zinc-binding domain(904.1.1)

FFamilyzf-B_box(904.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00643zf-B_box

B-box zinc finger

ClanCL0782BBOX

External Links

ECOD PDB View: 3Q1D RCSB PDB: 3Q1D PDBe: 3Q1D UniProt: Q9BYV2

Downloads

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