ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ak1A2 - ECOD Domain | ECOD

ECOD/Domains/e3ak1A2

e3ak1A2

UID: 000142215

PDB

Range: A:89-212
PDB: 3AK1 chain A(all domains)
UniProt: Q9Y8H8 (all domains)
Gene: sod

Molecule: Superoxide dismutase [Mn/Fe]

3D Structure

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Related Domains

Browse other domains in Sod_Fe_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupFe,Mn superoxide dismutase (SOD)-C(228)

HH-groupFe,Mn superoxide dismutase (SOD)-C(228.1)

TT-groupFe,Mn superoxide dismutase (SOD)-C(228.1.1)

FFamilySod_Fe_C(228.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02777Sod_Fe_C

Iron/manganese superoxide dismutases, C-terminal domain

External Links

ECOD PDB View: 3AK1 RCSB PDB: 3AK1 PDBe: 3AK1 UniProt: Q9Y8H8

Downloads

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