ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lurA1 - ECOD Domain | ECOD

ECOD/Domains/e4lurA1

e4lurA1

UID: 001422901

PDB

Range: A:70-309
PDB: 4LUR chain A(all domains)
UniProt: F1Q9N9 (all domains)
Gene: rbp3

Molecule: Interphotoreceptor Retinoid-Binding Protein(IRBP)

3D Structure

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Related Domains

Browse other domains in Peptidase_S41 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyPeptidase_S41(2486.1.1.7)

Ligands

in contact, ≤ 4 Å

Oleic acidOLA
within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03572Peptidase_S41

Peptidase family S41

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 4LUR RCSB PDB: 4LUR PDBe: 4LUR UniProt: F1Q9N9

Downloads

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