ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lurA2 - ECOD Domain | ECOD

ECOD/Domains/e4lurA2

e4lurA2

UID: 001422902

PDB

Range: A:1-69
PDB: 4LUR chain A(all domains)
UniProt: F1Q9N9 (all domains)
Gene: rbp3

Molecule: Interphotoreceptor Retinoid-Binding Protein(IRBP)

3D Structure

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Related Domains

Browse other domains in Peptidase_S41_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTail specific protease helical domain(3694)

HH-groupTail specific protease helical domain(3694.1)

TT-groupTail specific protease helical domain(3694.1.1)

FFamilyPeptidase_S41_N(3694.1.1.1)

Ligands

in contact, ≤ 4 Å

Oleic acidOLA

+ 2 additives (HEPES, Glycerin)

HEPESEPE
DrugBank DB16872
GlycerinGOL

Pfam Families

PF11918Peptidase_S41_N

N-terminal domain of Peptidase_S41 in eukaryotic IRBP

External Links

ECOD PDB View: 4LUR RCSB PDB: 4LUR PDBe: 4LUR UniProt: F1Q9N9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.