ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4u4yq21 - ECOD Domain | ECOD

ECOD/Domains/e4u4yq21

e4u4yq21

UID: 001426091

PDB

Range: q2:2-106
PDB: 4U4Y chain q2(all domains)
UniProt: P0CX27 (all domains)
Gene: RPL42A

Molecule: 60S ribosomal protein L42-A

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L44 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L44(375.1.1.5)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX
Zinc ionZN
metal

Shown in the structure viewer.

Pfam Families

PF00935Ribosomal_L44

Ribosomal protein L44

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 4U4Y RCSB PDB: 4U4Y PDBe: 4U4Y UniProt: P0CX27

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.