ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v45G5 - ECOD Domain | ECOD

ECOD/Domains/e4v45G5

e4v45G5

UID: 001428228

PDB

Range: G:334-625
PDB: 4V45 chain G(all domains)
UniProt: P00722 (all domains)
Gene: lacZ

Molecule: Beta-Galactosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_2_C(2002.1.1.104)

Ligands

in contact, ≤ 4 Å

2-deoxy-2-fluoro-β-D-galactose2FG
drugDrugBank DB02228
Magnesium ionMG
metal
Sodium ionNA
metal

Pfam Families

PF02836Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4V45 RCSB PDB: 4V45 PDBe: 4V45 UniProt: P00722

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.