ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3r3tA1 - ECOD Domain | ECOD

ECOD/Domains/e3r3tA1

e3r3tA1

UID: 000142851

PDB

Range: A:0-94
PDB: 3R3T chain A(all domains)
UniProt: Q81JI2 (all domains)
Gene: rpsF

Molecule: 30S ribosomal protein S6

3D Structure

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Related Domains

Browse other domains in Ribosomal_S6 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRibosomal protein S6(304.12)

TT-groupRibosomal protein S6(304.12.1)

FFamilyRibosomal_S6(304.12.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Sulfate ion, Glycerin)

Sulfate ionSO4
DrugBank DB14546
Glycerin

Pfam Families

PF01250Ribosomal_S6

Ribosomal protein S6

External Links

ECOD PDB View: 3R3T RCSB PDB: 3R3T PDBe: 3R3T UniProt: Q81JI2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.