ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rcmA1 - ECOD Domain | ECOD

ECOD/Domains/e3rcmA1

e3rcmA1

UID: 000143045

PDB

Range: A:1-265
PDB: 3RCM chain A(all domains)
UniProt: Q88KH9 (all domains)
Gene: tatD

Molecule: TatD family hydrolase

3D Structure

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Related Domains

Browse other domains in TatD_DNase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTatD_DNase(2002.1.1.44)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Acetate, Citric acid)

AcetateACT
DrugBank DB14511
Citric acid

Pfam Families

PF01026TatD_DNase

TatD related DNase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3RCM RCSB PDB: 3RCM PDBe: 3RCM UniProt: Q88KH9

Downloads

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DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.