ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3n9wA1 - ECOD Domain | ECOD

ECOD/Domains/e3n9wA1

e3n9wA1

UID: 000143371

PDB

Range: A:6-228
PDB: 3N9W chain A(all domains)
UniProt: Q46893 (all domains)
Gene: ispD

Molecule: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

3D Structure

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Related Domains

Browse other domains in IspD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyIspD(7516.1.1.5)

Ligands

in contact, ≤ 4 Å

(S)-propane-1,2-diolPGO
drugDrugBank DB04349
(R)-Propylene glycolPGR
drugDrugBank DB02159

Shown in the structure viewer.

Pfam Families

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

ClanCL0110GT-A

External Links

ECOD PDB View: 3N9W RCSB PDB: 3N9W PDBe: 3N9W UniProt: Q46893

Downloads

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Drug annotations from DrugDomain.