ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v62AX1 - ECOD Domain | ECOD

ECOD/Domains/e4v62AX1

e4v62AX1

UID: 001434639

RepresentativePDB

Range: AX:11-47
PDB: 4V62 chain AX(all domains)
UniProt: Q9F1R6 (all domains)
Gene: psbX

Molecule: Photosystem II PsbX protein

3D Structure

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Related Domains

Browse other domains in PsbX →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II PsbX protein(3493)

HH-groupPhotosystem II PsbX protein(3493.1)

TT-groupPhotosystem II PsbX protein(3493.1.1)

FFamilyPsbX(3493.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

Pfam Families

Photosystem II reaction centre X protein (PsbX)

External Links

ECOD PDB View: 4V62 RCSB PDB: 4V62 PDBe: 4V62 UniProt: Q9F1R6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.