ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ayhA1 - ECOD Domain | ECOD

ECOD/Domains/e3ayhA1

e3ayhA1

UID: 000143849

PDB

Range: A:1-129
PDB: 3AYH chain A(all domains)
UniProt: Q9C0Z9 (all domains)
Gene: rpc17

Molecule: DNA-directed RNA polymerase III subunit rpc9

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyRNA_pol_Rpb4(102.1.1.11)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03874RNA_pol_Rpb4

RNA polymerase Rpb4

ClanCL0426HRDC-like

External Links

ECOD PDB View: 3AYH RCSB PDB: 3AYH PDBe: 3AYH UniProt: Q9C0Z9

Downloads

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