ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4v88Cd1 - ECOD Domain | ECOD

ECOD/Domains/e4v88Cd1

e4v88Cd1

UID: 001440930

PDB

Range: Cd:4-56
PDB: 4V88 chain Cd(all domains)
UniProt: P41057 (all domains)
Gene: RPS29A

Molecule: 40S ribosomal protein S29-A

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S14 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyRibosomal_S14(377.1.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX
Zinc ionZN

Pfam Families

PF00253Ribosomal_S14

Ribosomal protein S14p/S29e

ClanCL0839Tbcl_zf

External Links

ECOD PDB View: 4V88 RCSB PDB: 4V88 PDBe: 4V88 UniProt: P41057

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.