ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v88DB1 - ECOD Domain | ECOD

ECOD/Domains/e4v88DB1

e4v88DB1

UID: 001440939

PDB

Range: DB:2-387
PDB: 4V88 chain DB(all domains)
UniProt: P14126 (all domains)
Gene: RPL3

Molecule: 60S ribosomal protein L3

3D Structure

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Related Domains

Browse other domains in Ribosomal_L3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyRibosomal_L3(1.1.7.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00297Ribosomal_L3

Ribosomal protein L3

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 4V88 RCSB PDB: 4V88 PDBe: 4V88 UniProt: P14126

Downloads

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