ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v88DP1 - ECOD Domain | ECOD

ECOD/Domains/e4v88DP1

e4v88DP1

UID: 001440969

PDB

Range: DP:2-156
PDB: 4V88 chain DP(all domains)
UniProt: P05740 (all domains)
Gene: RPL17A

Molecule: 60S ribosomal protein L17-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_L22 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupEnolase-N/ribosomal protein(218)

HH-groupRibosomal protein L22(218.2)

TT-groupRibosomal protein L22(218.2.1)

FFamilyRibosomal_L22(218.2.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00237Ribosomal_L22

Ribosomal protein L22p/L17e

External Links

ECOD PDB View: 4V88 RCSB PDB: 4V88 PDBe: 4V88 UniProt: P05740

Downloads

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