ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v8yAG1 - ECOD Domain | ECOD

ECOD/Domains/e4v8yAG1

e4v8yAG1

UID: 001443423

PDB

Range: AG:1-226
PDB: 4V8Y chain AG(all domains)
UniProt: P0CX37 (all domains)
Gene: RPS6A

Molecule: 40S RIBOSOMAL PROTEIN S6-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_S6e →

Classification

AArchitecturebeta barrels(a.1)

XX-groupRibosomal protein L25-like(239)

HH-groupRibosomal protein L25-like(239.1)

TT-groupRibosomal protein L25-like(239.1.1)

FFamilyRibosomal_S6e(239.1.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01092Ribosomal_S6e

Ribosomal protein S6e

External Links

ECOD PDB View: 4V8Y RCSB PDB: 4V8Y PDBe: 4V8Y UniProt: P0CX37

Downloads

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