ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v8zAE3 - ECOD Domain | ECOD

ECOD/Domains/e4v8zAE3

e4v8zAE3

UID: 001443513

PDB

Range: AE:2-116
PDB: 4V8Z chain AE(all domains)
UniProt: P0CX35 (all domains)
Gene: RPS4A

Molecule: 40S RIBOSOMAL PROTEIN S4-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_S4e,S4,RS4NT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4e,S4,RS4NT(221.1.2.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00900Ribosomal_S4e

Ribosomal family S4e

ClanCL0021OB

S4 domain

ClanCL0492S4

RS4NT (NUC023) domain

External Links

ECOD PDB View: 4V8Z RCSB PDB: 4V8Z PDBe: 4V8Z UniProt: P0CX35

Downloads

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