ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v8zAN2 - ECOD Domain | ECOD

ECOD/Domains/e4v8zAN2

e4v8zAN2

UID: 001443524

PDB

Range: AN:2-82
PDB: 4V8Z chain AN(all domains)
UniProt: P05756 (all domains)
Gene: RPS13

Molecule: 40S RIBOSOMAL PROTEIN S13

3D Structure

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Related Domains

Browse other domains in Ribosomal_S13_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-group40S ribosomal protein S13 N-terminal domain(101.40)

TT-group40S ribosomal protein S13 N-terminal domain(101.40.1)

FFamilyRibosomal_S13_N(101.40.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08069Ribosomal_S13_N

Ribosomal S13/S15 N-terminal domain

External Links

ECOD PDB View: 4V8Z RCSB PDB: 4V8Z PDBe: 4V8Z UniProt: P05756

Downloads

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