ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v9fO1 - ECOD Domain | ECOD

ECOD/Domains/e4v9fO1

e4v9fO1

UID: 001445384

PDB

Range: O:1-115
PDB: 4V9F chain O(all domains)
UniProt: P12733 (all domains)
Gene: rpl18e

Molecule: 50S ribosomal protein L18e

3D Structure

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Related Domains

Browse other domains in Ribosomal_L27A →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRibosomal protein L13/L15p/L18e/L32e(2490)

HH-groupRibosomal proteins L15p and L18e(2490.3)

TT-groupRibosomal proteins L15p and L18e(2490.3.1)

FFamilyRibosomal_L27A(2490.3.1.1)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
Chloride ionCL
Potassium ionK

Pfam Families

PF00828Ribosomal_L27A

Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A

ClanCL0588Ribos_L15p_L18e

External Links

ECOD PDB View: 4V9F RCSB PDB: 4V9F PDBe: 4V9F UniProt: P12733

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.