ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3racA1 - ECOD Domain | ECOD

ECOD/Domains/e3racA1

e3racA1

UID: 000144560

PDB

Range: A:15-365
PDB: 3RAC chain A(all domains)
UniProt: C8WUX4 (all domains)
Gene: Aaci_0923

Molecule: Histidine-tRNA ligase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_His →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_His(314.1.1.9)

Ligands

in contact, ≤ 4 Å

(2S)-2-hydroxybutanedioic acidLMR
Sodium ionNA
metal

+ 2 additives (Acetic acid, Glycerin)

Acetic acidACY

Pfam Families

PF13393tRNA-synt_His

Histidyl-tRNA synthetase

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 3RAC RCSB PDB: 3RAC PDBe: 3RAC UniProt: C8WUX4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03166

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.