ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rh7A4 - ECOD Domain | ECOD

ECOD/Domains/e4rh7A4

e4rh7A4

UID: 001447873

RepresentativePDB

Range: A:1934-2118
PDB: 4RH7 chain A(all domains)
UniProt: Q8NCM8 (all domains)
Gene: DYNC2H1

Molecule: Green fluorescent protein/Cytoplasmic dynein 2 heavy chain 1

3D Structure

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Related Domains

Browse other domains in AAA_5, AAA_6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_5, AAA_6(2004.1.1.500)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Adp orthovanadateAOV
Magnesium ionMG

Pfam Families

AAA domain (dynein-related subfamily)

ClanCL0023P-loop_NTPase

Hydrolytic ATP binding site of dynein motor region

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4RH7 RCSB PDB: 4RH7 PDBe: 4RH7 UniProt: Q8NCM8

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.