ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zxhA1 - ECOD Domain | ECOD

ECOD/Domains/e3zxhA1

e3zxhA1

UID: 000144977

PDB

Range: A:104-272
PDB: 3ZXH chain A(all domains)
UniProt: P45452 (all domains)
Gene: MMP13

Molecule: COLLAGENASE 3

3D Structure

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Related Domains

Browse other domains in Peptidase_M10 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M10(2498.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
N-hydroxy-N^2^-(3-methylbutyl)-N^2^-(naphthalen-2-ylsulfonyl)-D-valinamideE41
Zinc ionZN

Pfam Families

PF00413Peptidase_M10

Matrixin

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3ZXH RCSB PDB: 3ZXH PDBe: 3ZXH UniProt: P45452

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.