ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ri0A1 - ECOD Domain | ECOD

ECOD/Domains/e3ri0A1

e3ri0A1

UID: 000145226

PDB

Range: A:3-158
PDB: 3RI0 chain A(all domains)
UniProt: Q5SHN1 (all domains)
Gene: TTHA1699

Molecule: BB_2cx5_001

3D Structure

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Related Domains

Browse other domains in tRNA_edit →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupYbaK/ProRS associated domain(299)

HH-groupYbaK/ProRS associated domain(299.1)

TT-groupYbaK/ProRS associated domain(299.1.1)

FFamilytRNA_edit(299.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer.

Pfam Families

PF04073tRNA_edit

Aminoacyl-tRNA editing domain

External Links

ECOD PDB View: 3RI0 RCSB PDB: 3RI0 PDBe: 3RI0 UniProt: Q5SHN1

Downloads

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Drug annotations from DrugDomain.