ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zvlA1 - ECOD Domain | ECOD

ECOD/Domains/e3zvlA1

e3zvlA1

UID: 000145287

PDB

Range: A:340-522
PDB: 3ZVL chain A(all domains)
UniProt: Q9JLV6 (all domains)
Gene: Pnkp

Molecule: BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE

3D Structure

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Related Domains

Browse other domains in AAA_33 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_33(2004.1.1.208)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Acetate, Glycerol)

AcetateACT
DrugBank DB14511
GlycerolGOL

Shown in the structure viewer.

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3ZVL RCSB PDB: 3ZVL PDBe: 3ZVL UniProt: Q9JLV6

Downloads

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Drug annotations from DrugDomain.