ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2y4zA1 - ECOD Domain | ECOD

ECOD/Domains/e2y4zA1

e2y4zA1

UID: 000145432

PDB

Range: A:1-132
PDB: 2Y4Z chain A(all domains)
UniProt: P03336 (all domains)
Gene: gag

Molecule: CAPSID PROTEIN P30

3D Structure

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Related Domains

Browse other domains in Gag_p30 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyGag_p30(170.2.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02093Gag_p30

Gag P30 core shell protein

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 2Y4Z RCSB PDB: 2Y4Z PDBe: 2Y4Z UniProt: P03336

Downloads

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