ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3u4oA1 - ECOD Domain | ECOD

ECOD/Domains/e3u4oA1

e3u4oA1

UID: 000145543

PDB

Range: A:358-568
PDB: 3U4O chain A(all domains)
UniProt: O92972 (all domains)

Molecule: RNA-directed RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyRdRP_3(4967.1.1.5)

Ligands

in contact, ≤ 4 Å

1-[(2-aminopyridin-4-yl)methyl]-5-chloro-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid08E

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 3U4O RCSB PDB: 3U4O PDBe: 3U4O UniProt: O92972

Downloads

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