ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k0yA1 - ECOD Domain | ECOD

ECOD/Domains/e3k0yA1

e3k0yA1

UID: 000146189

RepresentativePDB

Range: A:34-109
PDB: 3K0Y chain A(all domains)
UniProt: A6LF92 (all domains)
Gene: BDI_2637

Molecule: Putative TOXIN related protein

3D Structure

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Related Domains

Browse other domains in NigD_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupOB domain in putative lipoprotein BF3042-related proteins(2.18)

TT-groupOB domain in putative lipoprotein BF3042-related proteins(2.18.1)

FFamilyNigD_N(2.18.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Nonaethylene glycol)

Nonaethylene glycol2PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NigD-like N-terminal OB domain

ClanCL0021OB

External Links

ECOD PDB View: 3K0Y RCSB PDB: 3K0Y PDBe: 3K0Y UniProt: A6LF92

Downloads

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