ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kogA1 - ECOD Domain | ECOD

ECOD/Domains/e3kogA1

e3kogA1

UID: 000146209

RepresentativePDB

Range: A:39-122
PDB: 3KOG chain A(all domains)
UniProt: A6L7K2 (all domains)
Gene: BVU_4064

Molecule: Putative pore-forming toxin

3D Structure

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Related Domains

Browse other domains in DUF3869 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupPrealbumin-like(11.1.4)

FFamilyDUF3869(11.1.4.21)

Ligands

in contact, ≤ 4 Å

(4R)-2-METHYLPENTANE-2,4-DIOLMRD

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12985DUF3869

Domain of unknown function (DUF3869)

ClanCL0287Transthyretin

External Links

ECOD PDB View: 3KOG RCSB PDB: 3KOG PDBe: 3KOG UniProt: A6L7K2

Downloads

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