ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ivpA1 - ECOD Domain | ECOD

ECOD/Domains/e3ivpA1

e3ivpA1

UID: 000146666

RepresentativePDB

Range: A:3-76
PDB: 3IVP chain A(all domains)
UniProt: Q180H4 (all domains)
Gene: CD630_33300

Molecule: Putative transposon-related DNA-binding protein

3D Structure

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Related Domains

Browse other domains in HTH_3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-grouptetra-helical, lambda repressor-like(101.1.4)

FFamilyHTH_3(101.1.4.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Helix-turn-helix

ClanCL0123HTH

External Links

ECOD PDB View: 3IVP RCSB PDB: 3IVP PDBe: 3IVP UniProt: Q180H4

Downloads

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