ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3b08B1 - ECOD Domain | ECOD

ECOD/Domains/e3b08B1

e3b08B1

UID: 000146834

RepresentativePDB

Range: B:191-248
PDB: 3B08 chain B(all domains)
UniProt: Q9WUB0 (all domains)
Gene: Rbck1

Molecule: RanBP-type and C3HC4-type zinc finger-containing protein 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in zf-RanBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyzf-RanBP(375.1.1.4)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00641Zn_ribbon_RanBP

Zn-finger in Ran binding protein and others

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 3B08 RCSB PDB: 3B08 PDBe: 3B08 UniProt: Q9WUB0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure