ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xrsA2 - ECOD Domain | ECOD

ECOD/Domains/e1xrsA2

e1xrsA2

UID: 000146885

RepresentativePDB

Range: A:130-516
PDB: 1XRS chain A(all domains)
UniProt: E3PRJ5 (all domains)
Gene: kamD

Molecule: D-lysine 5,6-aminomutase alpha subunit

3D Structure

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Related Domains

Browse other domains in Lys-AminoMut_A →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyLys-AminoMut_A(2002.1.1.158)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
5'-DEOXYADENOSINE5AD
CobalaminB12

Pfam Families

PF09043Lys-AminoMut_A

D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1XRS RCSB PDB: 1XRS PDBe: 1XRS UniProt: E3PRJ5

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.