ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3u88C1 - ECOD Domain | ECOD

ECOD/Domains/e3u88C1

e3u88C1

UID: 000148063

PDB

Range: C:347-429
PDB: 3U88 chain C(all domains)
UniProt: O75475 (all domains)
Gene: PSIP1

Molecule: Lens epithelium-derived growth factor

3D Structure

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Related Domains

Browse other domains in LEDGF →

Classification

AArchitecturealpha bundles(a.7)

XX-groupN-cbl like(611)

HH-groupConserved domain common to transcription factors TFIIS, elongin A, CRSP70(611.3)

TT-groupConserved domain common to transcription factors TFIIS, elongin A, CRSP70(611.3.1)

FFamilyLEDGF(611.3.1.2)

Ligands

in contact, ≤ 4 Å

CanavanineGGB
drugDrugBank DB01833
Glyoxylic acidGLV
drugDrugBank DB04343

+ 1 additive (Sulfate ion)

Pfam Families

Lens epithelium-derived growth factor (LEDGF)

External Links

ECOD PDB View: 3U88 RCSB PDB: 3U88 PDBe: 3U88 UniProt: O75475

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.