ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ddjA1 - ECOD Domain | ECOD

ECOD/Domains/e4ddjA1

e4ddjA1

UID: 000148127

PDB

Range: A:1-80
PDB: 4DDJ chain A(all domains)
UniProt: P07602 (all domains)
Gene: PSAP

Molecule: Saposin-A

3D Structure

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Related Domains

Browse other domains in SapB_2,SapB_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSaposin-like(198)

HH-groupSaposin-like(198.1)

TT-groupSaposin-like(198.1.1)

FFamilySapB_2,SapB_1(198.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Dodecyldimethylamine N-oxide)

Dodecyldimethylamine N-oxideLDA
DrugBank DB04147

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Saposin-like type B, region 2

ClanCL0707Saposin_like

Saposin-like type B, region 1

ClanCL0707Saposin_like

External Links

ECOD PDB View: 4DDJ RCSB PDB: 4DDJ PDBe: 4DDJ UniProt: P07602

Downloads

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